Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_70933837_70936215_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70933837 - 70936215

Intron Length:

2379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTTCGTTAC

5'SS Class:

major

3'SS Sequence:

TTCTTTTACTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TTTTCTTTTACT

Flanking Amino Acid:

GWRSRVLSAAGSEMDSLERS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.3

39.5

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

80.1

0.68

0.8

81.2

29.7

Minor 5ss

36.3

-1.6

2.9

45.5

42.7

Minor BPS

80.4

1.04

1.5

96.11

29.5

Associated Gene:

Gene:

FAM118A

Ensembl Gene ID:

ENSAPLG00000008680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028838

70925090 - 70936434

11345

ENSAPLT00000009168

70925090 - 70936434

11345