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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70959826_70960654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70959826 - 70960654

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTATGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

TGGAACTTAACA

Flanking Amino Acid:

GFLASVFFAVMRSEDASEET

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

77.7

0.69

30.2

Major PPT

67.3

0.39

38.6

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

64.1

0.44

1.6

70.37

41.2

Associated Gene:

Gene:

UPK3A

Ensembl Gene ID:

ENSAPLG00000008649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040900

70958764 - 70965725

6962

ENSAPLT00000008990

70959738 - 70967281

7544