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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70961330_70962531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70961330 - 70962531

Intron Length:

1202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAATTC

5'SS Class:

major

3'SS Sequence:

TTTCCCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

AAATACCTAATT

Flanking Amino Acid:

NPPLSPDTTYRFKYVLVDNS

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

33.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

79.2

0.66

0.7

73.1

25.2

Minor 5ss

47.9

-0.2

2.9

67.6

43.7

Minor BPS

0.17

1.8

70.9

39.3

Associated Gene:

Gene:

UPK3A

Ensembl Gene ID:

ENSAPLG00000008649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040900

70958764 - 70965725

6962

ENSAPLT00000008990

70959738 - 70967281

7544