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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70962812_70965329_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70962812 - 70965329

Intron Length:

2518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

ACCTCTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

GTATTGTTAAAA

Flanking Amino Acid:

TIYLYVMKESASAMSSLVTD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.4

20.6

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

71.6

0.49

0.8

64.8

30.1

Minor 5ss

34.8

-1.7

2.8

44.9

43.2

Minor BPS

51.3

0.04

2.1

65.99

Associated Gene:

Gene:

UPK3A

Ensembl Gene ID:

ENSAPLG00000008649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040900

70958764 - 70965725

6962

ENSAPLT00000008990

70959738 - 70967281

7544