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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70965498_70965661_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70965498 - 70965661

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTGGTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

AGATTTTGAAGT

Flanking Amino Acid:

VLCCLGLLSAVFLPDQSLKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.3

1.04

0.8

79.7

35.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

70.5

0.46

1.2

79.2

38.4

Minor 5ss

-1.9

3.2

43.9

Minor BPS

1.7

64.39

39.9

Associated Gene:

Gene:

UPK3A

Ensembl Gene ID:

ENSAPLG00000008649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040900

70958764 - 70965725

6962

ENSAPLT00000008990

70959738 - 70967281

7544