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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70965726_70967224_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

70965726 - 70967224

Intron Length:

1499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

CTTTTTGTGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.2

36.4

Major BPS

68.7

0.47

0.9

67.9

Major PPT

77.4

0.62

0.9

70.8

39.8

Minor 5ss

38.5

-1.3

2.8

50.4

39.2

Minor BPS

0.24

77.64

39.7

Associated Gene:

Gene:

UPK3A

Ensembl Gene ID:

ENSAPLG00000008649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008990

70959738 - 70967281

7544