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Intron Name: Anas_platyrhynchos_platyrhynchos_1_71084285_71087577_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
71084285 - 71087577

Intron Length:
3293

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACAGTG

5'SS Class:
major

3'SS Sequence:
ATATTTTTCTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
TCTTTTTCAATA

Flanking Amino Acid:
SVYLNLILQKQVFASPSKHP

Intron Amino Acid Position:
131

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1.1
69.9
41.1

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
82.6
0.73
0.8
81.2
35.6

Minor 5ss
39.6
-1.2
3.5
55.7
48.5

Minor BPS
62.5
0.39
1.5
70.41
36.7

Associated Gene:

Gene:
KIAA0930

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

71027890 - 71098646
70757