Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_71094657_71097855_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71094657 - 71097855

Intron Length:

3199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGATTTT

5'SS Class:

major

3'SS Sequence:

TTCCCTTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TTTCCCTTCCCC

Flanking Amino Acid:

ITLPLHRILTDILEVRQKPI

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

77.2

33.9

Major BPS

72.7

0.57

72.1

31.1

Major PPT

79.9

0.67

0.7

72.6

32.1

Minor 5ss

38.6

-1.3

3.4

57.3

47.4

Minor BPS

45.5

-0.3

3.6

75.89

40.7

Associated Gene:

Gene:

KIAA0930

Ensembl Gene ID:

ENSAPLG00000008316

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008661

71059472 - 71098646

39175

ENSAPLT00000040571

71060639 - 71098795

38157

ENSAPLT00000027756

71061592 - 71098795

37204

ENSAPLT00000025173

71027890 - 71098646

70757

ENSAPLT00000017810

71027890 - 71098795

70906