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Intron Name: Anas_platyrhynchos_platyrhynchos_1_71110757_71111484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71110757 - 71111484

Intron Length:

728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGGATG

5'SS Class:

major

3'SS Sequence:

ATATTATAAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

AATATTATAAGC

Flanking Amino Acid:

PVTMLIRVKTNNWKTVYLGP

Intron Amino Acid Position:

453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

72.3

38.9

Major BPS

75.9

0.64

66.1

40.5

Major PPT

65.2

0.34

1.1

43.3

Minor 5ss

32.1

-2

3.3

39.9

40.1

Minor BPS

45.6

-0.3

1.8

55.11

36.7

Associated Gene:

Gene:

NUP50

Ensembl Gene ID:

ENSAPLG00000007979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046842

71110606 - 71120881

10276