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Intron Name: Anas_platyrhynchos_platyrhynchos_1_71111635_71113394_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71111635 - 71113394

Intron Length:

1760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCTATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

ATTTTTTTAACT

Flanking Amino Acid:

QLLVRADTNLGNILLNVLIP

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.6

92.3

16.1

Major BPS

87.3

0.93

0.8

36.5

Major PPT

75.6

0.58

0.9

69.7

35.6

Minor 5ss

-1.7

2.7

41.8

44.8

Minor BPS

84.4

1.16

0.9

93.73

26.7

Associated Gene:

Gene:

NUP50

Ensembl Gene ID:

ENSAPLG00000007979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008307

71111254 - 71120881

9628

ENSAPLT00000046842

71110606 - 71120881

10276