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Intron Name: Anas_platyrhynchos_platyrhynchos_1_71113514_71115141_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71113514 - 71115141

Intron Length:

1628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTGCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACACAA

U12 Branch Point Sequence:

TCTACACAAACT

Flanking Amino Acid:

IKEDDAFYSKKCKLFYKKDN

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

78.6

28.8

Major BPS

60.7

0.27

67.2

29.6

Major PPT

75.7

0.58

0.9

72.4

37.8

Minor 5ss

34.7

-1.7

3.2

43.7

38.1

Minor BPS

46.2

-0.2

2.2

70.74

45.5

Associated Gene:

Gene:

NUP50

Ensembl Gene ID:

ENSAPLG00000007979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046842

71110606 - 71120881

10276

ENSAPLT00000008307

71111254 - 71120881

9628