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Intron Name: Anas_platyrhynchos_platyrhynchos_1_71115221_71116180_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71115221 - 71116180

Intron Length:

960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTAAAG

Flanking Amino Acid:

QTESVNSDDKDGEEKEEEPP

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

31.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.7

0.71

83.1

31.3

Minor 5ss

39.9

-1.1

3.2

57.4

46.8

Minor BPS

66.5

0.38

1.7

73.73

38.3

Associated Gene:

Gene:

NUP50

Ensembl Gene ID:

ENSAPLG00000007979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046842

71110606 - 71120881

10276

ENSAPLT00000008307

71111254 - 71120881

9628