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Intron Name: Anas_platyrhynchos_platyrhynchos_1_71164085_71166290_F

Intron Information:

Intron Rank:

128511

Intron Class:

major

Intron Phase:

Intron Coordinates:

71164085 - 71166290

Intron Length:

2206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAG

U12 Branch Point Sequence:

CTGAGCACAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

75.3

40.4

Major BPS

57.3

0.18

1.7

57.1

49.4

Major PPT

79.3

0.66

0.9

76.4

37.7

Minor 5ss

36.8

-1.5

3.5

56.4

47.8

Minor BPS

41.8

-0.6

2.1

52.22

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021999

71163014 - 71178718

15705