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Intron Name: Anas_platyrhynchos_platyrhynchos_1_71605239_71607459_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71605239 - 71607459

Intron Length:

2221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGTTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

CTGCTCATAATC

Flanking Amino Acid:

MLQAIFYPVQGKEPSVRQLA

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

0.9

79.2

28.8

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

0.45

74.4

34.1

Minor 5ss

-2.4

39.4

46.1

Minor BPS

50.9

0.01

1.6

59.98

39.6

Associated Gene:

Gene:

PRR5

Ensembl Gene ID:

ENSAPLG00000013310

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025318

71578605 - 71629804

51200

ENSAPLT00000013906

71578605 - 71629821

51217