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Intron Name: Anas_platyrhynchos_platyrhynchos_1_71898622_71900562_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

71898622 - 71900562

Intron Length:

1941

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAACAGAG

5'SS Class:

weak_major

3'SS Sequence:

TGAAGGCACAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTAGAAT

U12 Branch Point Sequence:

TTGGCCTAGAAT

Flanking Amino Acid:

GDICTFRVWHRNLFPTSWLC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.8

0.16

1.2

40.4

Major BPS

50.5

0.01

1.5

61.7

41.5

Major PPT

42.1

-0.4

1.7

35.1

40.2

Minor 5ss

37.5

-1.4

3.4

52.4

45.5

Minor BPS

50.1

0.08

71.8

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046664

71898470 - 71901358

2889