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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72346409_72347233_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72346409 - 72347233

Intron Length:

825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTTTT

5'SS Class:

major

3'SS Sequence:

TGTGTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TGTTTGTTATTT

Flanking Amino Acid:

CFPMGVQSGDRICDGVQFGA

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

81.7

32.3

Major BPS

74.5

0.61

79.6

29.1

Major PPT

0.77

0.8

36.6

Minor 5ss

48.6

-0.1

2.4

67.6

43.4

Minor BPS

50.7

0.1

2.2

75.8

41.6

Associated Gene:

Gene:

SAMM50

Ensembl Gene ID:

ENSAPLG00000002728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029170

72346363 - 72363719

17357

ENSAPLT00000002799

72346363 - 72362133

15771