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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72347376_72348549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72347376 - 72348549

Intron Length:

1174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTCGAT

U12 Branch Point Sequence:

TCTACTTCGATT

Flanking Amino Acid:

NAGNLCNLNYGDGPRAHLQK

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.6

38.4

Major BPS

61.4

0.28

1.3

61.8

44.5

Major PPT

83.1

0.74

0.8

81.2

30.8

Minor 5ss

36.7

-1.5

3.2

48.7

41.4

Minor BPS

54.4

0.22

1.6

71.54

40.1

Associated Gene:

Gene:

SAMM50

Ensembl Gene ID:

ENSAPLG00000002728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029170

72346363 - 72363719

17357

ENSAPLT00000002799

72346363 - 72362133

15771