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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72349257_72350041_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72349257 - 72350041

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAG|GCAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTGTATTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TTAACCTAAATT

Flanking Amino Acid:

IGDKPSSIADRFYLGGPTSV

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.8

1.13

0.8

81.8

38.5

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

66.1

0.36

59.6

41.4

Minor 5ss

33.5

-1.9

48.7

47.5

Minor BPS

66.1

0.58

1.7

81.65

Associated Gene:

Gene:

SAMM50

Ensembl Gene ID:

ENSAPLG00000002728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029170

72346363 - 72363719

17357

ENSAPLT00000002799

72346363 - 72362133

15771