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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72350113_72351402_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72350113 - 72351402

Intron Length:

1290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

QLNKQLLWDLVFSASLWGGM

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

82.5

30.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

73.9

0.54

75.2

27.4

Minor 5ss

46.3

-0.4

2.8

64.2

42.3

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

SAMM50

Ensembl Gene ID:

ENSAPLG00000002728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029170

72346363 - 72363719

17357

ENSAPLT00000002799

72346363 - 72362133

15771