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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72351490_72352656_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72351490 - 72352656

Intron Length:

1167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTATTA

5'SS Class:

major

3'SS Sequence:

TCTGTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

ACAACTTTAAAT

Flanking Amino Acid:

KRGALLKINQELAGYTGGDV

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

70.6

36.1

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

40.2

-1.1

3.4

48.1

Minor BPS

0.39

1.4

69.37

41.2

Associated Gene:

Gene:

SAMM50

Ensembl Gene ID:

ENSAPLG00000002728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029170

72346363 - 72363719

17357

ENSAPLT00000002799

72346363 - 72362133

15771