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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72352729_72353430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72352729 - 72353430

Intron Length:

702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGGCTT

5'SS Class:

major

3'SS Sequence:

TGATTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

GATAAGTGAACT

Flanking Amino Acid:

SGHSLKSSLSHAMVIDSRNS

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

66.7

44.2

Major BPS

71.2

0.53

70.3

31.9

Major PPT

83.7

0.76

0.8

81.2

36.2

Minor 5ss

39.6

-1.2

3.6

66.5

44.4

Minor BPS

44.8

-0.3

2.3

65.34

Associated Gene:

Gene:

SAMM50

Ensembl Gene ID:

ENSAPLG00000002728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029170

72346363 - 72363719

17357

ENSAPLT00000002799

72346363 - 72362133

15771