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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72353560_72354044_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72353560 - 72354044

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTAGCAAAATT

Flanking Amino Acid:

TDRGISTELNFPIWKTNHTL

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

83.5

27.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

38.7

-1.3

3.4

53.7

43.8

Minor BPS

43.9

-0.3

2.2

66.31

44.3

Associated Gene:

Gene:

SAMM50

Ensembl Gene ID:

ENSAPLG00000002728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029170

72346363 - 72363719

17357

ENSAPLT00000002799

72346363 - 72362133

15771