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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72354133_72354354_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72354133 - 72354354

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGGAAT

5'SS Class:

major

3'SS Sequence:

AATGTTGTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

AATAGCTTCACT

Flanking Amino Acid:

FKPQPGNFERNFSVNLYKVT

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

72.4

38.9

Major BPS

0.5

1.1

76.9

32.8

Major PPT

74.2

0.54

Minor 5ss

34.2

-1.8

3.5

47.8

42.6

Minor BPS

49.6

0.05

2.2

72.43

Associated Gene:

Gene:

SAMM50

Ensembl Gene ID:

ENSAPLG00000002728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029170

72346363 - 72363719

17357

ENSAPLT00000002799

72346363 - 72362133

15771