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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72354486_72356672_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72354486 - 72356672

Intron Length:

2187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGGATC

5'SS Class:

major

3'SS Sequence:

TTAATTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

TMVGNNEGSMVLGLKFPNLF

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

69.8

40.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.3

0.57

0.9

74.6

Minor 5ss

35.9

-1.6

3.5

48.1

42.4

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

SAMM50

Ensembl Gene ID:

ENSAPLG00000002728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029170

72346363 - 72363719

17357

ENSAPLT00000002799

72346363 - 72362133

15771