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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72358199_72360383_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72358199 - 72360383

Intron Length:

2185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TCTCATCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTATCTCATCC

Flanking Amino Acid:

DVFKAKNLIDVMRKSHEARE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

88.7

0.96

0.8

36.5

Major PPT

75.7

0.58

0.8

70.1

30.4

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

54.5

0.12

1.8

71.15

Associated Gene:

Gene:

SAMM50

Ensembl Gene ID:

ENSAPLG00000002728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029170

72346363 - 72363719

17357

ENSAPLT00000002799

72346363 - 72362133

15771