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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72360486_72361983_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72360486 - 72361983

Intron Length:

1498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTACGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

TGTGTTTCAACA

Flanking Amino Acid:

TKQEILENKDVVVQHVHFDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

80.9

31.3

Major BPS

0.57

1.2

77.7

37.1

Major PPT

68.7

0.42

66.7

39.6

Minor 5ss

39.4

-1.2

2.7

51.9

37.5

Minor BPS

56.4

0.2

1.6

67.57

39.2

Associated Gene:

Gene:

SAMM50

Ensembl Gene ID:

ENSAPLG00000002728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029170

72346363 - 72363719

17357

ENSAPLT00000002799

72346363 - 72362133

15771