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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72544928_72546868_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

72544928 - 72546868

Intron Length:

1941

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTTGTTTTA

5'SS Class:

weak_major

3'SS Sequence:

AATAGAAAATTAG|A

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CTGTCCTTAATT

Flanking Amino Acid:

PLVGQKSVSVIRKDIQRSWR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.8

0.19

1.2

61.7

39.3

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

47.6

-0.1

1.1

39.9

42.2

Minor 5ss

-1.2

47.1

43.6

Minor BPS

82.2

1.09

1.1

87.53

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041743

72544712 - 72553175

8464