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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72832119_72853696_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72832119 - 72853696

Intron Length:

21578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCTTC

5'SS Class:

major

3'SS Sequence:

TCATTCGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

ATGAACTAAATT

Flanking Amino Acid:

TLQPDGKTCKDIDECLVNNG

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.3

73.2

39.3

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

78.7

0.65

0.9

72.9

37.1

Minor 5ss

43.8

-0.7

2.9

59.3

45.4

Minor BPS

49.5

0.04

1.9

68.02

42.9

Associated Gene:

Gene:

SCUBE1

Ensembl Gene ID:

ENSAPLG00000013297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019506

72693532 - 72881316

187785

ENSAPLT00000013895

72693532 - 72904362

210831