Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_72954820_72955264_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72954820 - 72955264

Intron Length:

445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TAAACTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TGTTGCTAAACT

Flanking Amino Acid:

NYAPGVTLKQVHCEEFIPLF

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

66.1

0.36

62.6

43.6

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

0.48

2.1

84.57

42.1

Associated Gene:

Gene:

TTLL12

Ensembl Gene ID:

ENSAPLG00000008852

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009260

72933215 - 72958943

25729