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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72976043_72976828_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

72976043 - 72976828

Intron Length:

786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAACAAAG

5'SS Class:

major

3'SS Sequence:

AGCACCCAGTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

CTTTGTTGAAGG

Flanking Amino Acid:

SHVDVSEDEEGNLDADVTSH

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.2

65.3

40.6

Major BPS

0.55

1.1

63.4

44.3

Major PPT

51.2

0.03

1.1

47.8

Minor 5ss

40.1

-1.1

2.9

49.3

Minor BPS

45.8

-0.4

2.2

55.32

46.3

Associated Gene:

Gene:

MCAT

Ensembl Gene ID:

ENSAPLG00000008917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039165

72973689 - 72976933

3245