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Intron Name: Anas_platyrhynchos_platyrhynchos_1_72976043_72979203_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

72976043 - 72979203

Intron Length:

3161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAACAAAG

5'SS Class:

major

3'SS Sequence:

TAGTAAGTTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGTTAC

U12 Branch Point Sequence:

TTTCTCTGCATT

Flanking Amino Acid:

SHVDVSEDEEIFQNLLT*

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.2

65.3

40.6

Major BPS

63.6

0.34

1.2

55.4

41.7

Major PPT

55.5

0.12

1.2

53.6

44.7

Minor 5ss

40.1

-1.1

2.9

49.3

Minor BPS

52.7

0.17

1.9

77.82

38.8

Associated Gene:

Gene:

MCAT

Ensembl Gene ID:

ENSAPLG00000008917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009265

72973689 - 72979227

5539