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Intron Name: Anas_platyrhynchos_platyrhynchos_1_73085457_73090437_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73085457 - 73090437

Intron Length:

4981

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

GATTTGTTAACA

Flanking Amino Acid:

QEQDELSFKAGDELTKMENE

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

91.7

0.94

0.6

87.6

22.6

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

61.5

0.36

2.1

72.95

38.7

Associated Gene:

Gene:

PACSIN2

Ensembl Gene ID:

ENSAPLG00000009134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009543

73061864 - 73090550

28687