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Intron Name: Anas_platyrhynchos_platyrhynchos_1_73205992_73206999_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
73205992 - 73206999

Intron Length:
1008

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
AAG|GCAAGGCTG

5'SS Class:
strong_major

3'SS Sequence:
CTCTCTCTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTCCAT

U12 Branch Point Sequence:
GCTTTCTTCAGT

Flanking Amino Acid:
PSGLLVYKGKGVFAIRPEKK

Intron Amino Acid Position:
155

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.7
1.03
0.8
77
38.3

Major BPS
77.3
0.68
1.2
86.7
32.3

Major PPT
86.3
0.82
0.7
84.1
23.9

Minor 5ss
24
-3
4.1
37.6
47.1

Minor BPS
52.3
0.15
2.1
71.56
45.6

Associated Gene:

Gene:
CYB5R3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73197020 - 73211239
14220