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Intron Name: Anas_platyrhynchos_platyrhynchos_1_73222918_73223274_R


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
73222918 - 73223274

Intron Length:
357

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAAACAG

5'SS Class:
major

3'SS Sequence:
CTGTTTTTTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATTCAT

U12 Branch Point Sequence:
TATTCATTATCT

Flanking Amino Acid:
DDDDLDRLEQMEDSEGTVRQ

Intron Amino Acid Position:
858

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.3
0.69
1
64.9
41

Major BPS
92.2
1.05
0.7
91.9
19.6

Major PPT
88.3
0.86
0.7
84
31

Minor 5ss
30.7
-2.2
3.1
38.3
46.6

Minor BPS
67.2
0.62
1.9
86.85
38.3

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73222144 - 73271243
49100