Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_73223965_73224786_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73223965 - 73224786

Intron Length:

822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGGTTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAG

U12 Branch Point Sequence:

GTTTGGTTAAAA

Flanking Amino Acid:

RGSGVHGGLMVLEPRFNVET

Intron Amino Acid Position:

735

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

81.3

33.2

Major BPS

48.3

-0.1

1.7

59.3

47.1

Major PPT

0.23

1.2

60.3

44.1

Minor 5ss

42.8

-0.8

3.4

61.3

44.6

Minor BPS

48.8

-0.1

2.5

69.33

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009745

73222144 - 73271243

49100