Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_73230262_73230415_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73230262 - 73230415

Intron Length:

154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

GTCTCGGTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

CTTTGCTGCACT

Flanking Amino Acid:

HGKLDYHWVTRWLDDIGLPQ

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.4

26.9

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

64.4

0.32

0.9

61.2

40.1

Minor 5ss

45.6

-0.5

3.1

65.7

39.5

Minor BPS

49.3

0.03

2.4

76.42

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009745

73222144 - 73271243

49100