Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_73250812_73253015_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73250812 - 73253015

Intron Length:

2204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTGAA

5'SS Class:

major

3'SS Sequence:

GTGTCTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

GTGTCTGTTACA

Flanking Amino Acid:

QYEKKLKTTKDELAALKEKL

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

73.1

31.2

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

75.3

0.57

68.3

42.2

Minor 5ss

39.8

-1.1

3.1

48.3

42.4

Minor BPS

47.8

-0.1

2.3

63.45

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009745

73222144 - 73271243

49100