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Intron Name: Anas_platyrhynchos_platyrhynchos_1_73381750_73383747_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73381750 - 73383747

Intron Length:

1998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

AGCTATTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATGTTTACAAAT

Flanking Amino Acid:

MAVQHLKSLKGSTSSYTEVR

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

75.3

0.57

65.6

44.6

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

45.9

-0.2

1.8

64.42

39.9

Associated Gene:

Gene:

ARNTL2

Ensembl Gene ID:

ENSAPLG00000008758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009131

73361675 - 73395012

33338