Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_73414837_73416477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73414837 - 73416477

Intron Length:

1641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGATG

5'SS Class:

major

3'SS Sequence:

TGTCTATCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTCTTACTA

Flanking Amino Acid:

FFEGVDWGHIRERPAAIPIE

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

66.9

44.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.1

0.68

0.9

73.4

36.2

Minor 5ss

34.2

-1.8

3.5

47.9

47.8

Minor BPS

66.5

0.51

1.6

74.1

38.6

Associated Gene:

Gene:

STK38L

Ensembl Gene ID:

ENSAPLG00000008495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008872

73414592 - 73430300

15709