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Intron Name: Anas_platyrhynchos_platyrhynchos_1_73426299_73426859_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
73426299 - 73426859

Intron Length:
561

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTTTGTGGC

5'SS Class:
major

3'SS Sequence:
TTTCTCATTAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTCAT

U12 Branch Point Sequence:
TTCTCATTAAAG

Flanking Amino Acid:
KVIGRGAFGEVRLVQKKDTG

Intron Amino Acid Position:
102

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.8
0.56
1.2
64.4
40.2

Major BPS
94.9
1.12
0.6
93.9
14.7

Major PPT
75.3
0.57
1
75.8
31.7

Minor 5ss
35.5
-1.6
3
44.6
43.2

Minor BPS
63.5
0.29
1.8
70.06
42.7

Associated Gene:

Gene:
STK38L

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73414592 - 73430300
15709