Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_73428303_73430172_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73428303 - 73430172

Intron Length:

1870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCAGCT

5'SS Class:

major

3'SS Sequence:

TACTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTGTTTTACT

Flanking Amino Acid:

LITQHEERETRQKKLEVAME

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.2

63.6

41.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.6

0.73

0.8

76.8

31.4

Minor 5ss

37.5

-1.4

3.6

57.4

46.7

Minor BPS

57.8

0.33

2.1

79.44

Associated Gene:

Gene:

STK38L

Ensembl Gene ID:

ENSAPLG00000008495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008872

73414592 - 73430300

15709