Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_73534352_73536999_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

73534352 - 73536999

Intron Length:

2648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAATATTA

5'SS Class:

weak_major

3'SS Sequence:

TGTTCCCAGCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGAAA

U12 Branch Point Sequence:

TTGTTCCCAGCT

Flanking Amino Acid:

SICFQLIVLYVIGLLEASR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.1

65.3

34.5

Major BPS

57.6

0.19

1.3

67.9

36.3

Major PPT

61.8

0.27

55.9

40.4

Minor 5ss

44.2

-0.6

3.1

62.4

43.3

Minor BPS

47.6

-0.1

2.1

72.71

Associated Gene:

Gene:

TM7SF3

Ensembl Gene ID:

ENSAPLG00000008163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019491

73534325 - 73547343

13019

ENSAPLT00000030035

73534325 - 73547343

13019