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Intron Name: Anas_platyrhynchos_platyrhynchos_1_73539608_73539901_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
73539608 - 73539901

Intron Length:
294

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTATGTGTG

5'SS Class:
strong_major

3'SS Sequence:
TTTTTAATTGTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
CTTTTTTTAATT

Flanking Amino Acid:
KFAPANLGYARGANPPACDS

Intron Amino Acid Position:
155

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.9
0.89
0.9
77.9
36.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
83.5
0.75
0.8
79.2
32.9

Minor 5ss
42.4
-0.8
3.1
57.3
47.4

Minor BPS
77.9
0.95
1.1
86.64
33.8

Associated Gene:

Gene:
TM7SF3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73534325 - 73547343
13019

73534325 - 73547343
13019

73534940 - 73547343
12404

73533707 - 73547343
13637