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Intron Name: Anas_platyrhynchos_platyrhynchos_1_73690852_73692061_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
73690852 - 73692061

Intron Length:
1210

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATTTTTT

5'SS Class:
strong_major

3'SS Sequence:
GTACTTCTTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAAAAAT

U12 Branch Point Sequence:
TACTTCTTACAG

Flanking Amino Acid:
TSSKALWEIEVVHHDPCRGG

Intron Amino Acid Position:
286

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.8
0.73
1
82.4
30.8

Major BPS
62.8
0.32
1.1
67.9
34.4

Major PPT
79.3
0.66
0.9
72.6
37.4

Minor 5ss
58.1
0.27
2.3
76
39.6

Minor BPS
51.2
-0.1
1.8
57.08
44.4

Associated Gene:

Gene:
ITPR2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73637633 - 73906738
269106