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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_73723962_73725470_F

Intron Information:

Intron Rank:
16
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
73723962 - 73725470
Intron Length:
1509

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTTTGAAGT
5'SS Class:
major
3'SS Sequence:
TTTGACTGCACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTGAC
U12 Branch Point Sequence:
TGGTTTTTGACT
Flanking Amino Acid:
VNLLRRNREPRFLDYLSDLC
Intron Amino Acid Position:
628

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
71.9
0.52
1.2
69.3
41.1
Major BPS
86.5
0.91
0.8
77.4
37.4
Major PPT
70.8
0.47
1
64.8
41
Minor 5ss
37.6
-1.4
2.8
50.2
45.7
Minor BPS
69.2
0.69
1.2
78.8
37.8

Associated Gene:

Gene:
ITPR2
Ensembl Gene ID:
ENSAPLG00000014956
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000015781
73637633 - 73906738
269106