Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_73725591_73725691_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73725591 - 73725691

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TTGTGAGTGACT

Flanking Amino Acid:

PGNADILIQTKLVSTQMDNP

Intron Amino Acid Position:

668

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

35.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

0.83

0.7

81.4

30.6

Minor 5ss

45.7

-0.5

2.8

61.4

37.1

Minor BPS

44.6

-0.3

2.6

71.95

45.2

Associated Gene:

Gene:

ITPR2

Ensembl Gene ID:

ENSAPLG00000014956

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015781

73637633 - 73906738

269106