About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_73747893_73749436_F

Intron Information:

Intron Rank:
24
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
73747893 - 73749436
Intron Length:
1544

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTATATTCT
5'SS Class:
major
3'SS Sequence:
ATTTCTGTTGTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ACTTTAT
U12 Branch Point Sequence:
TCCCCCCTATTT
Flanking Amino Acid:
AAQAETMFAGRKEKNAVQLD
Intron Amino Acid Position:
1041

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.7
0.7
1
76.5
33
Major BPS
75.1
0.62
1
65.6
41
Major PPT
78.8
0.65
0.9
73.9
36.1
Minor 5ss
48.3
-0.2
2.6
68.1
42.9
Minor BPS
48
-0
1.9
65.76
45.1

Associated Gene:

Gene:
ITPR2
Ensembl Gene ID:
ENSAPLG00000014956
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000015781
73637633 - 73906738
269106