Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_73760382_73761568_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73760382 - 73761568

Intron Length:

1187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTAATCTGTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCAATTTTAATC

Flanking Amino Acid:

KNLNLFLTPGLLEAETMRHI

Intron Amino Acid Position:

1268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.9

90.9

28.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.6

0.49

70.3

40.9

Minor 5ss

41.2

-1

2.9

52.2

44.4

Minor BPS

60.9

0.32

1.3

62.9

37.1

Associated Gene:

Gene:

ITPR2

Ensembl Gene ID:

ENSAPLG00000014956

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015781

73637633 - 73906738

269106