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Intron Name: Anas_platyrhynchos_platyrhynchos_1_73826628_73827977_F


Intron Information:

Intron Rank:
39

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
73826628 - 73827977

Intron Length:
1350

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTTGTT

5'SS Class:
major

3'SS Sequence:
TTTTTTCCTTCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GAATGAT

U12 Branch Point Sequence:
GATAGCTTGAGT

Flanking Amino Acid:
LLEGGNTQTQYSTYQQLKEQ

Intron Amino Acid Position:
1791

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.4
0.67
1
78.3
36.2

Major BPS
59.1
0.23
1.3
51.7
43.9

Major PPT
94.3
1
0.5
93.3
15.5

Minor 5ss
37.6
-1.4
3.6
58.4
46.1

Minor BPS
47.5
-0.1
2.1
65.63
44.7

Associated Gene:

Gene:
ITPR2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73637633 - 73906738
269106