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Intron Name: Anas_platyrhynchos_platyrhynchos_1_73868590_73869917_F


Intron Information:

Intron Rank:
49

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
73868590 - 73869917

Intron Length:
1328

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAT|GTAAGTACT

5'SS Class:
strong_major

3'SS Sequence:
TTACACCCCACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTGAT

U12 Branch Point Sequence:
CTTTGTTTACAC

Flanking Amino Acid:
PTLILLGAANLCNKIVFLVS

Intron Amino Acid Position:
2315

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.1
0.85
0.9
86.5
28.5

Major BPS
91.3
1.03
0.7
79.6
35.6

Major PPT
69.4
0.44
0.9
62
34.3

Minor 5ss
40.8
-1
2.8
57.5
39.6

Minor BPS
47.7
-0.1
2.1
62.66
43.3

Associated Gene:

Gene:
ITPR2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73637633 - 73906738
269106